knitcitations: Citations for knitr markdown files

RMarkdownでの文献管理

CRAN: http://cran.r-project.org/web/packages/knitcitations/index.html
- Vignettes
  - An introduction to knitcitations
GitHub: https://github.com/cboettig/knitcitations
- Vignettes
  - tutorial

> library(knitcitations)

バージョン: 1.0.7

関数名	概略
`bib_metadata`	get the full metadata for a citation / bibliographic object
`bibliography`	Generate the bibliography
`cite_options`	Toggles for various citation options
`citep`	citep - inline parenthetical citation
`citet`	citet - inline parenthetical citation
`cleanbib`	cleanbib
`greycite`	greycite citation method
`read.bibtex`	read.bibtex
`record_as_cited`	record as cited
`write.bibtex`	write a bibtex file

cite_options

Arguments

citation_format
style
hyperlink
super
max.names
longnamesfirst
check.entries
...

citep, citet

文書中に引用文献をつける。DOIを与えることも可能。

括弧で囲う場合はcitep。utils::citationを使用

> citep(citation("RCurl"))

[1] "(Temple Lang and team, 2015)"

> citet(citation("RCurl"))

[1] "Temple Lang and team (2015)"

> citet("10.1890/11-0011.1")

[1] "Abrams, Ruokolainen, Shuter, and McCann (2012)"

cleanbib

現在のbib情報を削除する

> cleanbib()

read.bibtex

> read.bibtex(file      = "../inst/references.bib", 
+             .Encoding = "UTF-8", 
+             check     = FALSE)

[1] C. Boettiger. _knitcitations: Citations for Knitr Markdown
Files_. R package version 1.0.6. 2015. <URL:
http://CRAN.R-project.org/package=knitcitations>.

[2] D. T. Lang. _RCurl: General network (HTTP/FTP/...) client
interface for R_. R package version 1.95-4.6. 2015. <URL:
http://CRAN.R-project.org/package=RCurl>.

[3] Y. Xie. _Dynamic Documents with R and knitr_. ISBN
978-1482203530. Boca Raton, Florida: Chapman and Hall/CRC, 2013.
<URL: http://yihui.name/knitr/>.

[4] Y. Xie. "knitr: A Comprehensive Tool for Reproducible Research
in R". In: _Implementing Reproducible Computational Research_. Ed.
by V. Stodden, F. Leisch and R. D. Peng. ISBN 978-1466561595.
Chapman and Hall/CRC, 2014. <URL:
http://www.crcpress.com/product/isbn/9781466561595>.

[5] Y. Xie. _knitr: A General-Purpose Package for Dynamic Report
Generation in R_. R package version 1.10.5. 2015. <URL:
http://yihui.name/knitr/>.

write.bibtex

bibtexファイルの作成

> write.bibtex(c(citation("knitr"),
+                citation("knitcitations"),
+                citation("RCurl")),
+              file = "../inst/references.bib")