VGAM: Vector Generalized Linear and Additive Models

> library(VGAM)

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関数名 概略
A1A2A3 The A1A2A3 Blood Group System
AA.Aa.aa The AA-Aa-aa Blood Group System
AB.Ab.aB.ab The AB-Ab-aB-ab Blood Group System
ABO The ABO Blood Group System
AICvlm Akaike's Information Criterion
AR1 Autoregressive Process with Order-1 Family Function
BICvlm Bayesian Information Criterion
Benford Benford's Distribution
Benini The Benini Distribution
Betabinom The Beta-Binomial Distribution
Betageom The Beta-Geometric Distribution
Betanorm The Beta-Normal Distribution
Biamhcop Ali-Mikhail-Haq Bivariate Distribution
Bifgmcop Farlie-Gumbel-Morgenstern's Bivariate Distribution
Binom2.or Bivariate Binary Regression with an Odds Ratio
Binom2.rho Bivariate Probit Model
Binorm Bivariate normal distribution cumulative distribution function
Binormcop Gaussian Copula (Bivariate) Distribution
Biplackett Plackett's Bivariate Copula
Bisa The Birnbaum-Saunders Distribution
Bistudentt Bivariate Student-t distribution cumulative distribution function
Bort The Borel-Tanner Distribution
Brat Inputting Data to fit a Bradley Terry Model
Card Cardioid Distribution
Coef Computes Model Coefficients and Quantities
Coef.qrrvglm Returns Important Matrices etc. of a QO Object
Coef.qrrvglm-class Class "Coef.qrrvglm"
Coef.rrvglm Returns Important Matrices etc. of a RR-VGLM Object
Coef.rrvglm-class Class "Coef.rrvglm"
Coef.vlm Extract Model Coefficients for VLM Objects
CommonVGAMffArguments Common VGAM family function Arguments
Dagum The Dagum Distribution Expectiles-Exponential Expectiles of the Exponential Distribution
Expectiles-Normal Expectiles of the Normal Distribution
Expectiles-Uniform Expectiles of the Uniform Distribution
Expectiles-sc.t2 Expectiles/Quantiles of the Scaled Student t Distribution with 2 Df
Felix The Felix Distribution
Fisk The Fisk Distribution
Foldnorm The Folded-Normal Distribution
Frank Frank's Bivariate Distribution
Frechet The Frechet Distribution
GenbetaII The Generalized Beta II Distribution
Gompertz The Gompertz Distribution
Gumbel-II The Gumbel-II Distribution
Huggins89.t1 Table 1 of Huggins (1989)
Hzeta Haight's Zeta Distribution
Inv.gaussian The Inverse Gaussian Distribution
Inv.lomax The Inverse Lomax Distribution
Inv.paralogistic The Inverse Paralogistic Distribution
Kumar The Kumaraswamy Distribution
Lindley The Lindley Distribution
Links Link functions for VGLM/VGAM/etc. families
Lino The Generalized Beta Distribution (Libby and Novick, 1982)
Log Logarithmic Distribution
Lomax The Lomax Distribution
MNSs The MNSs Blood Group System
Makeham The Makeham Distribution
Max Maximums
Maxwell The Maxwell Distribution
Nakagami Nakagami Distribution
Opt Optimums
Paralogistic The Paralogistic Distribution
Pareto The Pareto Distribution
ParetoIV The Pareto(IV/III/II) Distributions
Perks The Perks Distribution
PoissonPoints Poisson Points Distribution
Polono The Poisson Lognormal Distribution
Posbinom Positive-Binomial Distribution
Posgeom Positive-geometric Distribution
Posnegbin Positive-Negative Binomial Distribution
Posnorm The Positive-Normal Distribution
Pospois Positive-Poisson Distribution
Qvar Quasi-variances Preprocessing Function
Rayleigh The Rayleigh Distribution
Rcim Mark the Baseline of Row and Column on a Matrix data
Rice The Rice Distribution
SURff Seemingly Unrelated Regressions Family Function
Select Select variables for a formula response or the RHS of a formula
Sinmad The Singh-Maddala Distribution
Skellam The Skellam Distribution
Slash Slash Distribution
SurvS4 Create a Survival Object
SurvS4-class Class "SurvS4"
Tikuv A Short-tailed Symmetric Distribution
Tobit The Tobit Distribution
Tol Tolerances
Triangle The Triangle Distribution
Truncpareto The Truncated Pareto Distribution
V1 V1 Flying-Bombs Hits in London
VGAM-package Vector Generalized Linear and Additive Models
Yules Yule-Simon Distribution
Zabinom Zero-Altered Binomial Distribution
Zageom Zero-Altered Geometric Distribution
Zanegbin Zero-Altered Negative Binomial Distribution
Zapois Zero-Altered Poisson Distribution
Zeta The Zeta Distribution
Zibinom Zero-Inflated Binomial Distribution
Zigeom Zero-Inflated Geometric Distribution
Zinegbin Zero-Inflated Negative Binomial Distribution
Zipf The Zipf Distribution
Zipois Zero-Inflated Poisson Distribution
acat Ordinal Regression with Adjacent Categories Probabilities
alaplace1 Asymmetric Laplace Distribution Family Functions
amlbinomial Binomial Logistic Regression by Asymmetric Maximum Likelihood Estimation
amlexponential Exponential Regression by Asymmetric Maximum Likelihood Estimation
amlnormal Asymmetric Least Squares Quantile Regression
amlpoisson Poisson Regression by Asymmetric Maximum Likelihood Estimation
auuc Auckland University Undergraduate Counts Data
aux.posbernoulli.t Auxiliary Function for the Positive Bernoulli Family Function with Time Effects
backPain Data on Back Pain Prognosis, from Anderson (1984)
beggs Bacon and Eggs Data
benini1 Benini Distribution Family Function
betaII Beta Distribution of the Second Kind
betaR The Two-parameter Beta Distribution Family Function
betabinomial Beta-binomial Distribution Family Function
betabinomialff Beta-binomial Distribution Family Function
betaff The Two-parameter Beta Distribution Family Function
betageometric Beta-geometric Distribution Family Function
betaprime The Beta-Prime Distribution
biamhcop Ali-Mikhail-Haq Distribution Family Function
biclaytoncop Clayton Copula (Bivariate) Family Function
bifgmcop Farlie-Gumbel-Morgenstern's Bivariate Distribution Family Function
bifgmexp Bivariate Farlie-Gumbel-Morgenstern Exponential Distribution Family Function
bifrankcop Frank's Bivariate Distribution Family Function
bigamma.mckay Bivariate Gamma: McKay's Distribution
bigumbelIexp Gumbel's Type I Bivariate Distribution Family Function
bilogis Bivariate Logistic Distribution
bilogistic Bivariate Logistic Distribution Family Function
binom2.or Bivariate Binary Regression with an Odds Ratio (Family Function)
binom2.rho Bivariate Probit Model (Family Function)
binomialff Binomial Family Function
binormal Bivariate normal distribution family function
binormalcop Gaussian Copula (Bivariate) Family Function
biplackettcop Plackett's Bivariate Copula Family Function
biplot,rrvglm-method Biplot of Constrained Regression Models
bisa Birnbaum-Saunders Distribution Family Function
bistudentt Bivariate Student-t Family Function
bmi.nz Body Mass Index of New Zealand Adults Data
borel.tanner Borel-Tanner Distribution Family Function
brat Bradley Terry Model
bratt Bradley Terry Model With Ties
calibrate Model Calibrations
calibrate,rrvglm-method Calibration for Constrained Regression Models
calibrate.qrrvglm Calibration for CQO and CAO models
calibrate.qrrvglm.control Control function for CQO/CAO calibration
cao Fitting Constrained Additive Ordination (CAO)
cao.control Control Function for RR-VGAMs (CAO)
cardioid Cardioid Distribution Family Function
cauchit Cauchit Link Function
cauchy Cauchy Distribution Family Function
cdf.lmscreg Cumulative Distribution Function for LMS Quantile Regression
cens.gumbel Censored Gumbel Distribution
cens.normal Censored Normal Distribution
cens.poisson Censored Poisson Family Function
cfibrosis Cystic Fibrosis Data
cgo Redirects the user to cqo
chest.nz Chest Pain in NZ Adults Data
chinese.nz Chinese Population in New Zealand 1867-2001 Data
chisq Chi-squared Distribution
clo Redirects the user to rrvglm
cloglog Complementary Log-log Link Function
coalminers Breathlessness and Wheeze Amongst Coalminers Data
coefvlm Extract Model Coefficients
concoef Extract Model Constrained/Canonical Coefficients
concoef-method Constrained (Canonical) Coefficients
confintvglm Confidence Intervals for VGLM Parameters
constraints Constraint Matrices
corbet Corbet's Butterfly Data
cqo Fitting Constrained Quadratic Ordination (CQO)
crashi Crashes on New Zealand Roads in 2009
cratio Ordinal Regression with Continuation Ratios
cumulative Ordinal Regression with Cumulative Probabilities
dAR1 The AR-1 Autoregressive Process
dagum Dagum Distribution Family Function
dalap The Laplace Distribution
dbiclaytoncop Clayton Copula (Bivariate) Distribution
deermice Captures of Peromyscus maniculatus, also known as deer mice.
deplot.lmscreg Density Plot for LMS Quantile Regression
depvar Response variable extracted
df.residual Residual Degrees-of-Freedom
dgenpois The Generalized Poisson Distribution
dgumbel The Gumbel Distribution
dhuber Huber's least favourable distribution
dirichlet Fitting a Dirichlet Distribution
dirmul.old Fitting a Dirichlet-Multinomial Distribution
dirmultinomial Fitting a Dirichlet-Multinomial Distribution
dlaplace The Laplace Distribution
dlogF log F Distribution
dloglap The Log-Laplace Distribution
double.cens.normal Univariate Normal Distribution with Double Censoring
double.expbinomial Double Exponential Binomial Distribution Family Function
dsimplex Simplex Distribution
ducklings Relative Frequencies of Serum Proteins in white Pekin ducklings
enzyme Enzyme Data
erf Error Function, and variants
erlang Erlang Distribution
expexpff Exponentiated Exponential Distribution
expexpff1 Exponentiated Exponential Distribution
expgeom The Exponential Geometric Distribution
expgeometric Exponential Geometric Distribution Family Function
expint The Exponential Integral and Variants
explink Exponential Link Function
explog The Exponential Logarithmic Distribution
explogff Exponential Logarithmic Distribution Family Function
exponential Exponential Distribution
exppois The Exponential Poisson Distribution
exppoisson Exponential Poisson Distribution Family Function
felix Felix Distribution Family Function
fff F Distribution Family Function
fill Creates a Matrix of Appropriate Dimension
finney44 Toxicity trial for insects
fisherz Fisher's Z Link Function
fisk Fisk Distribution family function
fittedvlm Fitted Values of a VLM object
flourbeetle Mortality of Flour Beetles from Carbon Disulphide
foldnormal Folded Normal Distribution Family Function
foldsqrt Folded Square Root Link Function
formulavlm Model Formulae and Term Names for VGLMs
frechet Frechet Distribution Family Function
freund61 Freund's (1961) Bivariate Extension of the Exponential Distribution
gamma1 1-parameter Gamma Distribution
gamma2 2-parameter Gamma Distribution
gammaR 2-parameter Gamma Distribution
gammahyperbola Gamma Hyperbola Bivariate Distribution
garma GARMA (Generalized Autoregressive Moving-Average) Models
gaussianff Gaussian (normal) Family Function
genbetaII Generalized Beta Distribution of the Second Kind
gengamma.stacy Generalized Gamma distribution family function
gengammaUC The Generalized Gamma Distribution
genpoisson Generalized Poisson distribution
genray The Generalized Rayleigh Distribution
genrayleigh Generalized Rayleigh Distribution Family Function
geometric Geometric (Truncated and Untruncated) Distributions
get.smart Retrieve One Component of ".smart.prediction"
get.smart.prediction Retrieves ".smart.prediction"
gev Generalized Extreme Value Distribution Family Function
gevUC The Generalized Extreme Value Distribution
gew General Electric and Westinghouse Data
golf Gamma-Ordinal Link Function
gompertz Gompertz Distribution Family Function
gpd Generalized Pareto Distribution Family Function
gpdUC The Generalized Pareto Distribution
grain.us Grain Prices Data in USA
grc Row-Column Interaction Models including Goodman's RC Association Model and Unconstrained Quadratic Ordination
gumbel Gumbel Distribution Family Function
gumbelII Gumbel-II Distribution Family Function
guplot Gumbel Plot
has.interceptvlm Has a Fitted VGLM Got an Intercept Term?
hatvalues Hat Values and Regression Deletion Diagnostics
hormone Hormone Assay Data
hspider Hunting Spider Data
huber2 Huber's least favourable distribution family function
hunua Hunua Ranges Data
hyperg Hypergeometric Family Function
hypersecant Hyperbolic Secant Distribution Family Function
hzeta Haight's Zeta Family Function
iam Index from Array to Matrix
identitylink Identity Link Function
inv.binomial Inverse Binomial Distribution Family Function
inv.gaussianff Inverse Gaussian Distribution Family Function
inv.lomax Inverse Lomax Distribution Family Function
inv.paralogistic Inverse Paralogistic Distribution Family Function
is.buggy Does the fitted object suffer from a known bug?
is.parallel Parallelism Constraint Matrices
is.smart Test For a Smart Object
is.zero Zero Constraint Matrices
kendall.tau Kendall's Tau Statistic
kumar Kumaraswamy Distribution Family Function
lakeO Annual catches on Lake Otamangakau from October 1974 to October 1989
lambertW The Lambert W function
laplace Laplace Distribution
latvar Latent Variables
leipnik Leipnik Distribution Family Function
lerch Lerch Phi Function
leukemia Acute Myelogenous Leukemia Survival Data
levy Levy Distribution Family Function
lgamma1 Log-gamma Distribution Family Function
lgammaUC The Log-Gamma Distribution
lindley 1-parameter Gamma Distribution
linkfun Link functions
linkfun.vglm Link Functions for VGLMs
lino Generalized Beta Distribution Family Function
lirat Low-iron Rat Teratology Data
lms.bcg LMS Quantile Regression with a Box-Cox transformation to a Gamma Distribution
lms.bcn LMS Quantile Regression with a Box-Cox Transformation to Normality
lms.yjn LMS Quantile Regression with a Yeo-Johnson Transformation to Normality
log1pexp Logarithms with an Unit Offset and Exponential Term
logF Natural Exponential Family Generalized Hyperbolic Secant Distribution Family Function
logLik.vlm Extract Log-likelihood for VGLMs/VGAMs/etc.
logc Complementary-log Link Function
loge Log link function, and variants
logff Logarithmic Distribution
logistic Logistic Distribution Family Function
logit Logit Link Function
loglaplace1 Log-Laplace and Logit-Laplace Distribution Family Functions
loglinb2 Loglinear Model for Two Binary Responses
loglinb3 Loglinear Model for Three Binary Responses
loglog Log-log Link Function
lognormal Lognormal Distribution
logoff Log link function with an offset
lomax Lomax Distribution Family Function
lqnorm Minimizing the L-q norm Family Function
lrtest Likelihood Ratio Test of Nested Models
lvplot Latent Variable Plot
lvplot.qrrvglm Latent Variable Plot for QO models
lvplot.rrvglm Latent Variable Plot for RR-VGLMs
machinists Machinists Accidents
makeham Makeham Distribution Family Function
margeff Marginal effects for the multinomial logit and cumulative models
marital.nz New Zealand Marital Data.
maxwell Maxwell Distribution Family Function
mccullagh89 McCullagh (1989) Distribution Family Function
melbmaxtemp melbmaxtemp daily maximum temperatures
meplot Mean Excess Plot
micmen Michaelis-Menten Model
mix2exp Mixture of Two Exponential Distributions
mix2normal Mixture of Two Univariate Normal Distributions
mix2poisson Mixture of Two Poisson Distributions
model.framevlm Construct the Model Frame of a VLM Object
model.matrixvlm Construct the Design Matrix of a VLM Object moffset Matrix Offset
multilogit Multi-logit Link Function
multinomial Multinomial Logit Model
nakagami Nakagami Distribution Family Function
nbcanlink Negative binomial canonical link function
nbolf Negative Binomial-Ordinal Link Function
negbinomial Negative Binomial Distribution Family Function
negbinomial.size Negative Binomial Distribution Family Function With Known Size
normal.vcm Univariate Normal Distribution as a Varying-Coefficient Model
nparam.vlm Number of Parameters
olym08 2008 and 2012 Summer Olympic Final Medal Count Data
ordpoisson Ordinal Poisson Family Function
oxtemp Oxford Temperature Data
paralogistic Paralogistic Distribution Family Function
paretoIV Pareto(IV/III/II) Distribution Family Functions
paretoff Pareto and Truncated Pareto Distribution Family Functions
perks Perks Distribution Family Function
perspqrrvglm Perspective plot for QRR-VGLMs
pgamma.deriv Derivatives of the Incomplete Gamma Integral
pgamma.deriv.unscaled Derivatives of the Incomplete Gamma Integral (Unscaled Version)
plotdeplot.lmscreg Density Plot for LMS Quantile Regression
plotqrrvglm Model Diagnostic Plots for QRR-VGLMs
plotqtplot.lmscreg Quantile Plot for LMS Quantile Regression
plotrcim0 Main effects plot for a Row-Column Interaction Model (RCIM)
plotvgam Default VGAM Plotting
plotvgam.control Control Function for plotvgam()
plotvglm Plots for VGLMs
pneumo Pneumoconiosis in Coalminers Data
poisson.points Poisson-points-on-a-plane/volume Distances Distribution
poissonff Poisson Family Function
polf Poisson-Ordinal Link Function
posbernUC Positive Bernoulli Sequence Model
posbernoulli.b Positive Bernoulli Family Function with Behavioural Effects
posbernoulli.t Positive Bernoulli Family Function with Time Effects
posbernoulli.tb Positive Bernoulli Family Function with Time and Behavioural Effects
posbinomial Positive Binomial Distribution Family Function
posnegbinomial Positive Negative Binomial Distribution Family Function
posnormal Positive Normal Distribution Family Function
pospoisson Positive Poisson Distribution Family Function
powerlink Power Link Function
prats Pregnant Rats Toxological Experiment Data
predictqrrvglm Predict Method for a CQO fit
predictvglm Predict Method for a VGLM fit
prentice74 Prentice (1974) Log-gamma Distribution
prinia Yellow-bellied Prinia
probit Probit Link Function
propodds Proportional Odds Model for Ordinal Regression
prplot Probability Plots for Categorical Data Analysis
put.smart Adds a List to the End of the List ".smart.prediction"
qrrvglm.control Control function for QRR-VGLMs (CQO)
qtplot.gumbel Quantile Plot for Gumbel Regression
qtplot.lmscreg Quantile Plot for LMS Quantile Regression
quasibinomialff Quasi-Binomial Family Function
quasipoissonff Quasi-Poisson Family Function
qvar Quasi-variances Extraction Function
rayleigh Rayleigh Distribution Family Function
rcqo Constrained Quadratic Ordination
rdiric The Dirichlet distribution
rec.exp1 Upper Record Values from a 1-parameter Exponential Distribution
rec.normal Upper Record Values from a Univariate Normal Distribution
reciprocal Reciprocal link function
rhobit Rhobit Link Function
riceff Rice Distribution Family Function
rigff Reciprocal Inverse Gaussian distribution
rlplot.egev Return Level Plot for GEV Fits
rrar Nested reduced-rank autoregressive models for multiple time series
rrvglm Fitting Reduced-Rank Vector Generalized Linear Models (RR-VGLMs)
rrvglm-class Class "rrvglm"
rrvglm.control Control function for rrvglm
rrvglm.optim.control Control function for rrvglm() calling optim()
ruge Rutherford-Geiger Polonium Data
s Defining smooths in VGAM formulae
sc.studentt2 Scaled Student t Distribution with 2 df Family Function
seq2binomial The Two-stage Sequential Binomial Distribution Family Function
setup.smart Smart Prediction Setup
simplex Simplex Distribution Family Function
simulate.vlm Simulate Responses for VGLMs and VGAMs
sinmad Singh-Maddala Distribution Family Function
skellam Skellam Distribution Family Function
skewnorm Skew-Normal Distribution
skewnormal Univariate Skew-Normal Distribution Family Function
slash Slash Distribution Family Function
smart.expression S Expression for Smart Functions
smart.mode.is Determine What Mode the Smart Prediction is In
smartpred Smart Prediction
sratio Ordinal Regression with Stopping Ratios
studentt Student t Distribution
summaryvglm Summarizing Vector Generalized Linear Model Fits
tikuv Short-tailed Symmetric Distribution Family Function
tobit Tobit Model
toxop Toxoplasmosis Data
triangle Triangle Distribution Family Function
trplot Trajectory Plot
trplot.qrrvglm Trajectory plot for QRR-VGLMs
truncweibull Truncated Weibull Distribution Family Function
ucberk University California Berkeley Graduate Admissions
uninormal Univariate Normal Distribution
vcovvlm Calculate Variance-Covariance Matrix for a Fitted VLM or RR-VGLM Object
venice Venice Maximum Sea Levels Data
vgam Fitting Vector Generalized Additive Models
vgam-class Class "vgam"
vgam.control Control function for vgam
vglm Fitting Vector Generalized Linear Models
vglm-class Class "vglm"
vglm.control Control function for vglm
vglmff-class Class "vglmff"
vonmises von Mises Distribution Family Function
vsmooth.spline Vector cubic smoothing spline
waitakere Waitakere Ranges Data
waldff Wald Distribution Family Function
weibull.mean Weibull Distribution Family Function, Parameterized by the Mean
weibullR Weibull Distribution Family Function
weightsvglm Prior and Working Weights of a VGLM fit
wine Bitterness in Wine Data
wrapup.smart Cleans Up After Smart Prediction
yeo.johnson Yeo-Johnson Transformation
yip88 Zero-Inflated Poisson Distribution (Yip (1988) algorithm)
yulesimon Yule-Simon Family Function
zabinomial Zero-Altered Binomial Distribution
zageometric Zero-Altered Geometric Distribution
zanegbinomial Zero-Altered Negative Binomial Distribution
zapoisson Zero-Altered Poisson Distribution
zero The zero Argument in VGAM Family Functions
zeta Riemann's Zeta Function
zetaff Zeta Distribution Family Function
zibinomial Zero-Inflated Binomial Distribution Family Function
zigeometric Zero-Inflated Geometric Distribution Family Function
zinegbinomial Zero-Inflated Negative Binomial Distribution Family Function
zipebcom Exchangeable bivariate cloglog odds-ratio model from a zero-inflated Poisson distribution
zipf Zipf Distribution Family Function
zipoisson Zero-Inflated Poisson Distribution Family Function