treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects

> library(treeplyr)

Loading required package: ape

Loading required package: dplyr


Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union


Attaching package: 'treeplyr'

The following object is masked from 'package:stats':

    reorder

バージョン: 0.1.1

関数名 概略
anolis Anole data
detectAllCharacters Apply detectCharacterType over an entire matrix
detectCharacterType Function to detect whether a character is continuous or discrete
filterMatrix Filter a matrix, returning either all continuous or all discrete characters
filter_.treedata Function for filtering rows from an object of class 'treedata'
forceFactor Function for checking whether a treedata object contains only factors and for forcing data columns into factor format
forceNames Force names for rows, columns, or both
forceNumeric Function for checking whether a treedata object contains only numeric columns and for forcing data columns into numeric format
getVector A function for returning a named vector from a data frame or matrix with row names
group_by_.treedata Function for grouping an object of class 'treedata'
hasNames Row and column name check
make.treedata Function for making an object of class 'treedata'
mutate_.treedata Function for mutating an object of class 'treedata'
paint_clades Add regimes to a treedata object
reorder Reorder a 'treedata' object
select_.treedata Function for selecting columns from an object of class 'treedata'
summarise_.treedata Function for summarizing an object of class 'treedata'
tdapply Apply a function over all treedata object columns and return a list of results, analogously to the normal apply function
treedply Run a function on a 'treedata' object
treeply Run a function on the phylogeny of a 'treedata' object
treeplyr treeplyr: 'dplyr' Functionality for Matched Tree and Data Objects